Heads of Laboratories
Laboratory of Protein and Nucleic Acid Chemistry
Ribosomes are giant molecular machines that produce all proteins necessary for life. In eukaryotic cells, their assembly is a highly elaborate and carefully coordinated process. The Klinge lab’s research is aimed at understanding the molecular mechanisms that govern early stages of eukaryotic ribosome assembly.
Ribosomes are responsible for decoding the information contained in messenger RNA to synthesize proteins used in all domains of life. Ribosome assembly, the process by which ribosomes are synthesized, involves approximately 200 protein and RNA factors in eukaryotes, most of which are essential. These factors are involved in all stages of ribosome assembly, from transcription of ribosomal RNA in the nucleolus to export into the cytoplasm, where the final stages of maturation and quality control occur. As ribosome assembly progresses, more and more of this machinery is released from intermediate complexes until the ribosomal subunits complete maturation.
The structure of this molecular machinery and the mechanisms by which it functions remain poorly understood. The Klinge lab’s major focus is to elucidate them in the context of intermediate complexes formed during the early stages of ribosome assembly, using the model system Saccharomyces cerevisiae. The group combines yeast genetics with novel biochemical tools, X-ray crystallography, and cryo-electron microscopy.
Klinge’s lab has studied the temporal order by which 70 factors associate with nascent pre-ribosomal RNA to form the small subunit processome, a giant pre-ribosomal particle. By studying ribosome assembly as a function of transcription, his lab has assigned proteins to particular stages of early ribosome assembly. In parallel, the researchers have used biochemical and structural biology methods to elucidate the functions of multi-protein complexes within the small subunit processome. More recently, they used cryo-electron microscopy to obtain the first architectural view of the S. cerevisiae small subunit processome, the earliest stable precursor of the small ribosomal subunit.
The lab ultimately aims to define the sequence of events that drive the formation of the eukaryotic ribosome at an atomic level.
Klinge is a faculty member in the David Rockefeller Graduate Program, the Tri-Institutional M.D.-Ph.D. Program, and the Tri-Institutional Ph.D. Program in Chemical Biology.
B.A. in biochemistry, 2005
Ph.D. in biochemistry, 2009
University of Cambridge
Swiss Federal Institute of Technology in Zurich, 2009–2013
Assistant Professor, 2013–
The Rockefeller University
Human Frontier Science Program Career Development Award, 2014
Alfred P. Sloan Research Fellowship, 2014
Irma T. Hirschl/Monique Weill-Caulier Trust Research Award, 2014
Rita Allen Foundation Scholar, 2014
NIH Director's New Innovator Award, 2016
Chaker-Margot, M. et al. Architecture of the yeast small subunit processome. Science 355, eaal1880 (2017).
Hunziker, M. et al. UtpA and UtpB chaperone nascent pre-ribosomal RNA and U3 snoRNA to initiate eukaryotic ribosome assembly. Nat Commun 7, 12090 (2016).
Chaker-Margot, M. et al. Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis. Nat. Struct. Mol. Biol. 22, 920–923. (2015).
Klinge, S. et al. Atomic structures of the eukaryotic ribosome. Trends Biochem. Sci. 37, 189–198 (2012).
Klinge, S. et al. Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science 334, 941–948 (2011).
Dr. Klinge is a faculty member in the David Rockefeller Graduate Program, the Tri-Institutional M.D.-Ph.D. Program, and the Tri-Institutional Ph.D. Program in Chemical Biology.